BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D01LP1|AL425677
(807 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1517 1565 0.0
3x_Contig38 995 0.0
>3x_Contig1517
Length = 8289
Score = 1565 bits (788), Expect = 0.0
Identities = 804/808 (99%), Gaps = 2/808 (0%)
Strand = Plus / Minus
Query: 1 gatcttcattttaagcttccagaaagt-ctcggttggccataagataaattaggactaaa 59
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 5074 gatcttcattttaagcttccagaaagttctcggttggccataagataaattaggac-aaa 5016
Query: 60 cgaaacaacacctacaaaagtagcagcgaacagatcatctgcttagaatagttcactgcg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5015 cgaaacaacacctacaaaagtagcagcgaacagatcatctgcttagaatagttcactgcg 4956
Query: 120 aatgagcaaggtattagctatacaatgtcatcaggcttcaagatgaagaggtcaaggagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4955 aatgagcaaggtattagctatacaatgtcatcaggcttcaagatgaagaggtcaaggagt 4896
Query: 180 cctgacccgataggaatcgataactataagaaacaacggctaatatatgatttcgaaaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4895 cctgacccgataggaatcgataactataagaaacaacggctaatatatgatttcgaaaac 4836
Query: 240 ctatcgttggctcctaggggaaccgatgggataaagaaacataaaattgattcagggttg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4835 ctatcgttggctcctaggggaaccgatgggataaagaaacataaaattgattcagggttg 4776
Query: 300 aactcattcaaagcagttgtaaataaaaggatgtgggatgtagttgaacgcgaattgagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4775 aactcattcaaagcagttgtaaataaaaggatgtgggatgtagttgaacgcgaattgagt 4716
Query: 360 ggttcaaacaaaaatgataagatatatgaaagaatattcgatcatgtacgacagtttaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4715 ggttcaaacaaaaatgataagatatatgaaagaatattcgatcatgtacgacagtttaac 4656
Query: 420 tcgcaggtaataaaatggtatgactggcgatctgtggtagcaagcttgtkggtaaaatgg 479
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4655 tcgcaggtaataaaatggtatgactggcgatctgtggtagcaagcttgtgggtaaaatgg 4596
Query: 480 taccaacagcatagtccaaaattagatgaagtagatatgaatgttgagactgcagcagat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4595 taccaacagcatagtccaaaattagatgaagtagatatgaatgttgagactgcagcagat 4536
Query: 540 tccagagttgatctggcaccgaatctcatgcatagaaatgatgagtttgatcacaatgcg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4535 tccagagttgatctggcaccgaatctcatgcatagaaatgatgagtttgatcacaatgcg 4476
Query: 600 gacatggacattgacatggatctcgatacagatccgtacgcggatgcagacatggacata 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4475 gacatggacattgacatggatctcgatacagatccgtacgcggatgcagacatggacata 4416
Query: 660 gagctggatgaatagtccttagacatgtttgtgaagtattattatcattttgatagaagt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4415 gagctggatgaatagtccttagacatgtttgtgaagtattattatcattttgatagaagt 4356
Query: 720 attaacacctatagagagagtatgtdaacaactgatttttacttgttgaactgaattaat 779
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4355 attaacacctatagagagagtatgtaaacaactgatttttacttgttgaactgaattaat 4296
Query: 780 gtgaaagaatataagagtgttaatgtca 807
||||||||||||||||||||||||||||
Sbjct: 4295 gtgaaagaatataagagtgttaatgtca 4268
>3x_Contig38
Length = 925
Score = 995 bits (501), Expect = 0.0
Identities = 541/554 (97%), Gaps = 12/554 (2%)
Strand = Plus / Minus
Query: 1 gatcttcattttaagcttccagaaagt-ctcggttggccataagataaattaggactaaa 59
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 547 gatcttcattttaagcttccagaaagttctcggttggccataagataaattaggac-aaa 489
Query: 60 cgaaacaacacctacaaaagtagcagcgaacagatcatctgcttagaatagttcactgcg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cgaaacaacacctacaaaagtagcagcgaacagatcatctgcttagaatagttcactgcg 429
Query: 120 aatgagcaaggtattagctatacaatgtcatcaggcttcaagatgaagaggtcaaggagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aatgagcaaggtattagctatacaatgtcatcaggcttcaagatgaagaggtcaaggagt 369
Query: 180 cctgacccgataggaatcgataactataagaaacaacggctaatatatgatttcgaaaac 239
||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cctgacc----------cgataactataagaaacaacggctaatatatgatttcgaaaac 319
Query: 240 ctatcgttggctcctaggggaaccgatgggataaagaaacataaaattgattcagggttg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctatcgttggctcctaggggaaccgatgggataaagaaacataaaattgattcagggttg 259
Query: 300 aactcattcaaagcagttgtaaataaaaggatgtgggatgtagttgaacgcgaattgagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aactcattcaaagcagttgtaaataaaaggatgtgggatgtagttgaacgcgaattgagt 199
Query: 360 ggttcaaacaaaaatgataagatatatgaaagaatattcgatcatgtacgacagtttaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ggttcaaacaaaaatgataagatatatgaaagaatattcgatcatgtacgacagtttaac 139
Query: 420 tcgcaggtaataaaatggtatgactggcgatctgtggtagcaagcttgtkggtaaaatgg 479
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 138 tcgcaggtaataaaatggtatgactggcgatctgtggtagcaagcttgtgggtaaaatgg 79
Query: 480 taccaacagcatagtccaaaattagatgaagtagatatgaatgttgagactgcagcagat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 taccaacagcatagtccaaaattagatgaagtagatatgaatgttgagactgcagcagat 19
Query: 540 tccagagttgatct 553
||||||||||||||
Sbjct: 18 tccagagttgatct 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5831
Number of Sequences: 1807
Number of extensions: 5831
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 2
length of query: 807
length of database: 10,358,551
effective HSP length: 16
effective length of query: 791
effective length of database: 10,329,639
effective search space: 8170744449
effective search space used: 8170744449
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)